Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847760.1_cds_XP_016510179.1_23045
CDS Infomation

[gene=LOC107827539] [db_xref=GeneID:107827539] [protein=uncharacterized protein LOC107827539 isoform X2] [protein_id=XP_016510179.1] [location=complement(join(6770..7219,7324..7500,7811..7855,9680..9756,9901..9952,10051..10209,11059..11157,11395..11475,11653..11776,13031..13125,14245..14371,14539..14642,16096..16134))] [gbkey=CDS]
Sequence

ATGCTTAAAGGGAAATGGTACCAAAGGAGGGATCTGGAGGTTAAAAATAGTAGGGATGAT
GTTCTTAAATGTACCCATTATATGCCTCTTATTCGTCCAGAAGGAAAGCCACTGCCTTGT
GTGATTTACTGTCATGGAAACAGCGGATGTAGAGCAGATGCCAGTGAAGCTGCTATTATA
TTATTGCCACTAAACATAACTGTTTTCACCCTTGACTTTTCTGGATCTGGACTTTCTGGA
GGCGAGCACGTTACATTGGGTTGGAATGAAAAGGATGATCTCAGAGCTGTGGTTGAATAT
CTGAGGACAGATGGCAATGTTTCTTTGATTGGCTTGTGGGGTCGTTCAATGGGTGCAGTT
ACTAGCCTCATGTACGGTGCTAAGGATCCATCCATTGCTGGAATGGTTTTAGACAGCCCC
TTCTCTGATTTGGTTGATTTGATGATGGAACTTGTAGACACTTACAAAATCCGGCTGCCC
AAGTTCACTGTAAAGTTTGCAATCCAATATATGCGCAGAGCGGTCTTAAAAAAGGCAAAG
TTTGACATAACCGAGTTGAACACAATTAAGGTGGCAAAGTCATGCTTCGTCCCTGTTTTA
CTGGGTCATGCCGTTGATGATGATTTTATACAGCCCCATCACTCTGATCGTGTATTTGAG
GCGTACATGGGGGACAAGAATATTATAAAATTTGAGGGTGATCACAACTCTCCACGCCCA
CAGTTTTATTTTGATTCTATAAGTATCTTCTTCAACAATGTTTTGCAACCACCAGAGGAT
GAAGCAGGGGGTGCATTCTTTGACATGCCACAAGATTATTTTGGCAAGGGCAGTTGGAGT
ACAGTCCATGAAGTTGACTTTATGGATGATGTCCATGATGTTGCAGCTGCACCAACTAGT
AGAACTGAAGATGTAATAAAGCAGGTTCGCTCCAAAAGACCCATGAGTCGGACAGAGGTC
CCGTCTGACATATCTGCGCAGGATAGCCAGACTGAAGACCAGGAAGAAGGTACTGGAACC
GACTCTGCCCCATCATCTTCAAAAATGATCAGCTTTGATCTTTCCAATGGTGACCCGTTG
GGTCCCAATGTTCCTGCATCAATAGATGATGATGACTATGTGGAATACTCACTTGATAGT
TTGGCAGATTTTCCTAGTAATGTGGAGGAAGAAGAAAGGATGTTAATGAAAGCAGTACTC
GAGTCTTTAAAAGACTTGGAGGTAAAACCTCCTCCAGCCGAGCAAGCATCCTCAAAAGTT
GTCGAAGAACTTCCTCAACCTTTGCAGGACAGTAAAGAGGAGTCAGCTTCTACAAAACAA
TGTACTCCCTCAAAAGAAATTAGTGCTAGTCCCATTGTTTCTAATGGACATGATTCAGAC
GCCAAAGTCCAAGTTCAAGATACTGTTAAAGTATCAGTAACACCAGCTAACAGTACTTTA
TCGGCGAAAGAAGTGAAAAGCAACGGGACTTCTTCTCATCGTGACATGTCTGTCAGCAGT
CAAAGTTCGTCCAGCGTTGACATGGTTGATGGTACTAAAGCCACTGTGACCGTTGTGAAG
AACCCAACAAGTAATATCATGGATGGTTTATTGCGTCGTTGGGATCTCAACTTTTTCAAG
AACAGATAA

Peptide Sequence

PEP ID

XP_016510179.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827539 isoform X2 [Nicotiana tabacum]
Sequence

MLKGKWYQRRDLEVKNSRDDVLKCTHYMPLIRPEGKPLPCVIYCHGNSGCRADASEAAII
LLPLNITVFTLDFSGSGLSGGEHVTLGWNEKDDLRAVVEYLRTDGNVSLIGLWGRSMGAV
TSLMYGAKDPSIAGMVLDSPFSDLVDLMMELVDTYKIRLPKFTVKFAIQYMRRAVLKKAK
FDITELNTIKVAKSCFVPVLLGHAVDDDFIQPHHSDRVFEAYMGDKNIIKFEGDHNSPRP
QFYFDSISIFFNNVLQPPEDEAGGAFFDMPQDYFGKGSWSTVHEVDFMDDVHDVAAAPTS
RTEDVIKQVRSKRPMSRTEVPSDISAQDSQTEDQEEGTGTDSAPSSSKMISFDLSNGDPL
GPNVPASIDDDDYVEYSLDSLADFPSNVEEEERMLMKAVLESLKDLEVKPPPAEQASSKV
VEELPQPLQDSKEESASTKQCTPSKEISASPIVSNGHDSDAKVQVQDTVKVSVTPANSTL
SAKEVKSNGTSSHRDMSVSSQSSSSVDMVDGTKATVTVVKNPTSNIMDGLLRRWDLNFFK
NR

Transcript Sequence

Gene sequence data has not been registered.